Effectiveness of combination of Mini-and Microsatellite loci to sub-type Mycobacterium avium subsp. paratuberculosis Italian type C isolates
2011

Sub-typing Mycobacterium avium in Cattle

Sample size: 84 publication 10 minutes Evidence: high

Author Information

Author(s): Ricchi Matteo, Barbieri Gianluca, Taddei Roberta, Belletti Gian L, Carra Elena, Cammi Giuliana, Garbarino Chiara A, Arrigoni Norma

Primary Institution: Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna

Hypothesis

The study aims to explore the effectiveness of combining Mini-and Microsatellite loci for sub-typing Mycobacterium avium subsp. paratuberculosis isolates.

Conclusion

The combination of Mini-and Microsatellite approaches effectively discriminates among Mycobacterium avium Type C isolates.

Supporting Evidence

  • The study differentiated 84 isolates into 33 clusters.
  • Six loci showed relevant allelic variability.
  • The intra-herd analysis revealed multiple genotypes in most herds.

Takeaway

Scientists found a way to tell different types of a germ that makes cows sick by looking at tiny parts of their DNA.

Methodology

The study analyzed 84 Mycobacterium avium isolates using MIRU-VNTR and SSR typing methods.

Potential Biases

Potential bias due to non-representative sampling and links related to cattle trading.

Limitations

The sampling was not representative of the whole country, limiting epidemiological conclusions.

Participant Demographics

Isolates were from different cattle herds primarily located in northern Italy.

Statistical Information

P-Value

0.952

Confidence Interval

0.933 to 0.972

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1746-6148-7-54

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