The Phytocyanin Gene Family in Rice (Oryza sativa L.): Genome-Wide Identification, Classification and Transcriptional Analysis
2011

Genome-Wide Analysis of the Phytocyanin Gene Family in Rice

Sample size: 62 publication 10 minutes Evidence: moderate

Author Information

Author(s): Ma Haoli, Zhao Heming, Zhi Zhao, Jie Yang

Primary Institution: State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, China

Hypothesis

There is an urgent need for a thorough genome-wide analysis of the OsPC gene family to elucidate their functions.

Conclusion

The genome-wide identification and expression analysis of OsPC genes should facilitate research in this gene family and provide new insights into their functions in higher plants.

Supporting Evidence

  • A total of 62 OsPC genes were identified through bioinformatics analysis.
  • The OsPC gene family was classified into three subclasses based on phylogeny.
  • 46 OsPCs were predicted to be glycosylphosphatidylinositol-anchored proteins.
  • Gene duplication analysis revealed that both chromosomal segment and tandem duplications contributed to the expansion of the gene family.
  • Expression profiles showed that many OsPC genes were abundantly expressed during various developmental stages.

Takeaway

Scientists studied a group of genes in rice that help plants deal with stress and grow, finding out how many there are and how they work.

Methodology

A comprehensive bioinformatics analysis was conducted to identify and classify OsPC genes, followed by expression profiling under various conditions.

Limitations

The study primarily focused on bioinformatics analysis and may not cover all functional aspects of the OsPC genes.

Statistical Information

P-Value

p<0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1371/journal.pone.0025184

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