Rhombomere-specific analysis reveals the repertoire of genetic cues expressed across the developing hindbrain
2009

Genetic Cues in Developing Hindbrain

Sample size: 12 publication Evidence: high

Author Information

Author(s): David Chambers, Leigh Jane Wilson, Fabienne Alfonsi, Ewan Hunter, Uma Saxena, Eric Blanc, Andew Lumsden

Primary Institution: MRC Centre for Developmental Neurobiology, King's College London

Hypothesis

What are the genetic cues expressed across the developing hindbrain?

Conclusion

The study identified hundreds of previously undescribed genes expressed in the developing mouse hindbrain, suggesting multiple unexplored mechanisms of Hox gene regulation.

Supporting Evidence

  • The study provides a comprehensive set of potential Hox target genes in the developing hindbrain.
  • Data suggests a new retinoic acid signaling system in ventral rhombomere 4.
  • Identified genes may contribute to the generation of neuronal subtypes characteristic of each rhombomere.

Takeaway

Scientists looked at the genes in the developing brain of mice to understand how they help shape the brain's structure and function.

Methodology

Microarray analysis of transcriptomes from individual rhombomeres of wild-type mouse embryos.

Potential Biases

Potential biases from using pooled samples and the limitations of microarray sensitivity.

Limitations

The study may miss some genes due to the complexity of gene expression in heterogeneous neuronal populations.

Participant Demographics

Wild-type CD1 mouse embryos at embryonic day 9.5.

Statistical Information

P-Value

0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1749-8104-4-6

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