Histone deacetylase inhibition accelerates the early events of stem cell differentiation: transcriptomic and epigenetic analysis
2008

Histone Deacetylase Inhibition and Stem Cell Differentiation

publication Evidence: moderate

Author Information

Author(s): Karantzali Efthimia, Schulz Herbert, Hummel Oliver, Hubner Norbert, Hatzopoulos AK, Kretsovali Androniki

Primary Institution: Institute of Molecular Biology and Biotechnology, FORTH, Heraklion, Greece

Hypothesis

Inhibition of histone deacetylases accelerates the early events of differentiation in stem cells.

Conclusion

Inhibition of histone deacetylases accelerates the early events of differentiation by regulating the expression of pluripotency- and differentiation-associated genes in an opposite manner.

Supporting Evidence

  • Histone deacetylase inhibition leads to rapid changes in gene expression.
  • Pluripotency factors like Nanog are suppressed while differentiation-related genes are activated.
  • Changes in histone modifications correlate with gene expression reprogramming.

Takeaway

When scientists blocked a certain protein in stem cells, the cells started to change into different types of cells faster than usual.

Methodology

Mouse embryonic stem cells were treated with the histone deacetylase inhibitor Trichostatin A and analyzed for gene expression changes using microarrays and epigenetic changes using chromatin immunoprecipitation assays.

Limitations

The study does not fully explore the long-term effects of histone deacetylase inhibition on stem cell differentiation.

Digital Object Identifier (DOI)

10.1186/gb-2008-9-4-r65

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