Methods for comparative metagenomics
2009

Methods for Comparative Metagenomics

publication Evidence: moderate

Author Information

Author(s): Huson Daniel H, Richter Daniel C, Mitra Suparna, Auch Alexander F, Schuster Stephan C

Primary Institution: Center for Bioinformatics ZBIT, Tübingen University

Hypothesis

How can we effectively compare multiple metagenomic datasets?

Conclusion

MEGAN 2.0 will provide powerful and user-friendly tools for comparative analysis of metagenomic data.

Supporting Evidence

  • MEGAN 2.0 will be made freely available for comparative analysis.
  • The study highlights the need for user-friendly tools in metagenomics.
  • Comparative analysis can reveal significant differences in microbial communities.

Takeaway

This study introduces new methods to compare different sets of genetic data from microbes, helping scientists understand how they differ.

Methodology

The study presents new methods for analyzing and comparing metagenomic datasets using the MEGAN software.

Potential Biases

There are substantial database biases toward model organisms, which can hinder accurate metagenomic analysis.

Limitations

The analysis may be affected by database biases and the complexity of microbial communities.

Digital Object Identifier (DOI)

10.1186/1471-2105-10-S1-S12

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