Membrane transporters and protein traffic networks differentially affecting metal tolerance: a genomic phenotyping study in yeast
2008

Study of Metal Tolerance in Yeast

Sample size: 388 publication 10 minutes Evidence: high

Author Information

Author(s): Ruotolo Roberta, Marchini Gessica, Ottonello Simone

Primary Institution: University of Parma

Hypothesis

How do non-essential proteins in yeast affect cell viability after exposure to metals like cadmium and nickel?

Conclusion

The study reveals that various pathways are involved in cadmium and nickel tolerance in yeast, highlighting the specificity of metal toxicity.

Supporting Evidence

  • 388 mutant strains were identified that were sensitive or resistant to cadmium and/or nickel.
  • Many conserved pathways centered on membrane transporters and protein traffic affect cell viability with a surprisingly high degree of metal specificity.
  • Statistical significance of GO term/gene group association was reported with a P-value < 0.001.

Takeaway

This study looked at how yeast cells survive when exposed to harmful metals, finding that different proteins help them deal with the stress in different ways.

Methodology

Genomic phenotyping was used to assess the role of all non-essential S. cerevisiae proteins in modulating cell viability after exposure to cadmium, nickel, and other metals.

Potential Biases

Potential bias in the selection of mutant strains and their representation in the study.

Limitations

The study primarily focuses on non-essential proteins and may not account for essential proteins' roles in metal tolerance.

Participant Demographics

Yeast strains from the S. cerevisiae Genome Deletion Project.

Statistical Information

P-Value

p<0.001

Statistical Significance

p<0.001

Digital Object Identifier (DOI)

10.1186/gb-2008-9-4-r67

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