Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains
2008

Diversity of E. coli Strains in Bacteremia

Sample size: 161 publication Evidence: moderate

Author Information

Author(s): Jaureguy Françoise, Landraud Luce, Passet Virginie, Diancourt Laure, Frapy Eric, Guigon Ghislaine, Carbonnelle Etienne, Lortholary Olivier, Clermont Olivier, Denamur Erick, Picard Bertrand, Nassif Xavier, Brisse Sylvain

Primary Institution: INSERM UMR570, Faculté de Médecine, Université Paris Descartes, Paris, France

Hypothesis

Can specific clonal groups of E. coli be associated with clinical features in bacteremia?

Conclusion

The study found that human bacteremia strains are highly diverse and that specific clonal complexes are associated with certain clinical features.

Supporting Evidence

  • Bacteremic E. coli isolates were distributed into five major lineages.
  • CC1 and CC4 were significantly associated with urinary tract infections.
  • No clonal complex was associated with severe sepsis or unfavorable outcomes.

Takeaway

Doctors studied 161 samples of E. coli from blood infections to see how different types of these germs can cause sickness. They found that some types are linked to specific health problems.

Methodology

The study used multilocus sequence typing (MLST) and comparative genomic hybridization (CGH) to analyze the genetic diversity and virulence factors of E. coli strains.

Potential Biases

Potential bias due to the selection of isolates from specific hospitals and the focus on certain clonal complexes.

Limitations

The study was limited to isolates from two hospitals in France, which may not represent the global diversity of E. coli.

Participant Demographics

Isolates were collected from patients with positive blood cultures in two French university hospitals.

Statistical Information

P-Value

p<0.05

Statistical Significance

p<0.05

Digital Object Identifier (DOI)

10.1186/1471-2164-9-560

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