Nuclear Accumulation of an Uncapped RNA Produced by Drosha Cleavage of a Transcript Encoding miR-10b and HOXD4 Biogenesis of Hoxd4 and miR-10b Transcripts
2011

How Hoxd4 and miR-10b Work Together in Mouse Embryo Development

publication 10 minutes Evidence: moderate

Author Information

Author(s): Phua Sze Lynn Calista, Sivakamasundari V., Shao Yu, Cai Xiaohan, Zhang Li-Feng, Lufkin Thomas, Featherstone Mark

Primary Institution: School of Biological Sciences, Nanyang Technological University, Singapore

Hypothesis

The expression of Hoxd4 and miR-10b is co-ordinately regulated during neural differentiation.

Conclusion

Hoxd4 and miR-10b transcripts are generated by Drosha cleavage and are co-regulated during neural differentiation.

Supporting Evidence

  • The expression profiles of Hoxd4 and miR-10b transcripts during neural differentiation of mouse embryonal carcinoma cells are co-ordinately regulated.
  • P1 transcripts are generated by Drosha cleavage of P2 transcripts, indicating a novel regulatory mechanism.
  • Uncapped P1 transcripts accumulate in the nucleus, suggesting a potential functional role.

Takeaway

This study shows that two important genes, Hoxd4 and miR-10b, work together in developing mouse embryos, helping to control how cells become different types of tissues.

Methodology

The study used quantitative reverse transcriptase PCR (qRT-PCR) and RNA-ligase mediated 5′ Rapid Amplification of cDNA Ends (5′ RLM-RACE) to analyze transcript levels and origins.

Limitations

The study does not explore the functional implications of the uncapped transcripts in detail.

Digital Object Identifier (DOI)

10.1371/journal.pone.0025689

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